Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Mir7654-201ENSMUST00000185082 70 ntBASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx6-1Q99MA9 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Gm8749-201ENSMUST00000117737 331 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Gm6244-201ENSMUST00000178732 841 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 App-207ENSMUST00000227737 2827 ntBASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-1Q99MA9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms