Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Gm12350-201ENSMUST00000121208 462 ntBASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Thap2-203ENSMUST00000218989 527 ntBASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap3Q99LM2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap3Q99LM2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap3Q99LM2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms