Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gm13015-201ENSMUST00000118674 204 ntBASIC16.57■□□□□ 0.24
Ddx41Q91VN6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gm27618-201ENSMUST00000183671 60 ntBASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gm27321-201ENSMUST00000185021 205 ntBASIC16.57■□□□□ 0.24
Ddx41Q91VN6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx41Q91VN6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Gm29541-201ENSMUST00000191351 678 ntBASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.56■□□□□ 0.24
Ddx41Q91VN6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx41Q91VN6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Gm13223-201ENSMUST00000118609 747 ntBASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx41Q91VN6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms