Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.81■□□□□ 0.28
StrcQ8VIM6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.81■□□□□ 0.28
StrcQ8VIM6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
StrcQ8VIM6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm12997-201ENSMUST00000120207 640 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm25261-201ENSMUST00000157416 134 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm42550-201ENSMUST00000201553 960 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.8■□□□□ 0.28
StrcQ8VIM6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.79■□□□□ 0.28
StrcQ8VIM6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.79■□□□□ 0.28
StrcQ8VIM6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Gm14350-201ENSMUST00000116642 640 ntBASIC16.79■□□□□ 0.28
StrcQ8VIM6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.79■□□□□ 0.28
StrcQ8VIM6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Gm7046-201ENSMUST00000221351 977 ntBASIC16.79■□□□□ 0.28
StrcQ8VIM6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
StrcQ8VIM6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.78■□□□□ 0.28
StrcQ8VIM6 Rps4l-202ENSMUST00000204242 789 ntBASIC16.78■□□□□ 0.28
StrcQ8VIM6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.78■□□□□ 0.28
StrcQ8VIM6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms