Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Gm12859-201ENSMUST00000117834 427 ntBASIC15.32■□□□□ 0.04
TraipQ8VIG6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.32■□□□□ 0.04
TraipQ8VIG6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Gm4804-201ENSMUST00000182234 999 ntBASIC15.32■□□□□ 0.04
TraipQ8VIG6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Gm5425-201ENSMUST00000214125 459 ntBASIC15.32■□□□□ 0.04
TraipQ8VIG6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TraipQ8VIG6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Gm10766-202ENSMUST00000194123 606 ntBASIC15.31■□□□□ 0.04
TraipQ8VIG6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.31■□□□□ 0.04
TraipQ8VIG6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Gm6218-201ENSMUST00000219812 628 ntBASIC15.31■□□□□ 0.04
TraipQ8VIG6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TraipQ8VIG6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gm42612-201ENSMUST00000197986 623 ntBASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gm43170-201ENSMUST00000199827 612 ntBASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gm5186-201ENSMUST00000218781 920 ntBASIC15.3■□□□□ 0.04
TraipQ8VIG6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TraipQ8VIG6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms