Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Gm5354-201ENSMUST00000182417 973 ntBASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shtn1Q8K2Q9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm12742-201ENSMUST00000117326 410 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm15393-201ENSMUST00000120499 219 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm27839-201ENSMUST00000184242 106 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Mir7654-201ENSMUST00000185082 70 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shtn1Q8K2Q9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shtn1Q8K2Q9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Gm9726-201ENSMUST00000180321 678 ntBASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 AA619741-201ENSMUST00000195095 646 ntBASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shtn1Q8K2Q9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms