Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Gm21854-201ENSMUST00000179901 471 ntBASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab11fip3Q8CHD8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Gm4804-201ENSMUST00000182234 999 ntBASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.61■□□□□ 0.57
Rab11fip3Q8CHD8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Gm5425-201ENSMUST00000214125 459 ntBASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Gm6218-201ENSMUST00000219812 628 ntBASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.6■□□□□ 0.57
Rab11fip3Q8CHD8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gm12859-201ENSMUST00000117834 427 ntBASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab11fip3Q8CHD8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms