Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm15483-201ENSMUST00000120338 456 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm2213-201ENSMUST00000197485 688 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm45098-201ENSMUST00000207179 657 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hist1h2aaQ8CGP4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Olfr286-202ENSMUST00000205305 969 ntBASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Gm10175-201ENSMUST00000086013 645 ntBASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hist1h2aaQ8CGP4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hist1h2aaQ8CGP4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h2aaQ8CGP4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms