Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Gm5566-201ENSMUST00000116118 459 ntBASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Gm5866-201ENSMUST00000177881 973 ntBASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Gm44344-201ENSMUST00000200287 129 ntBASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Gm24543-201ENSMUST00000103867 82 ntBASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbm28Q8CGC6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Gm8749-201ENSMUST00000117737 331 ntBASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbm28Q8CGC6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rbm28Q8CGC6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rbm28Q8CGC6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rbm28Q8CGC6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rbm28Q8CGC6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rbm28Q8CGC6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rbm28Q8CGC6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rbm28Q8CGC6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rbm28Q8CGC6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Rbm28Q8CGC6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17■□□□□ 0.31
Rbm28Q8CGC6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rbm28Q8CGC6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms