Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.17■□□□□ 0.02
Fam228aQ8CDW1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.16■□□□□ 0.02
Fam228aQ8CDW1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam228aQ8CDW1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.14■□□□□ 0.01
Fam228aQ8CDW1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms