Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lrif1Q8CDD9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Lrif1Q8CDD9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.26□□□□□ -0.13
Lrif1Q8CDD9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrif1Q8CDD9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms