Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.18□□□□□ -0.46
Nhlrc3Q8CCH2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Olfr286-202ENSMUST00000205305 969 ntBASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Gm10060-201ENSMUST00000212002 111 ntBASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc3Q8CCH2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Gm2451-201ENSMUST00000199447 999 ntBASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Gm10290-201ENSMUST00000200451 999 ntBASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc3Q8CCH2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms