Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf31Q8CCF0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Gm10275-202ENSMUST00000168697 495 ntBASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Mir8102-201ENSMUST00000184148 139 ntBASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Gm7775-201ENSMUST00000218871 853 ntBASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Dupd1-202ENSMUST00000224735 548 ntBASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Gm10275-201ENSMUST00000092620 635 ntBASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf31Q8CCF0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf31Q8CCF0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gm12428-201ENSMUST00000119844 727 ntBASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf31Q8CCF0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Gm27321-201ENSMUST00000185021 205 ntBASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf31Q8CCF0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms