Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Gm4459-201ENSMUST00000118750 468 ntBASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Mir8098-201ENSMUST00000184011 137 ntBASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Gm18041-201ENSMUST00000218210 618 ntBASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Gm8655-201ENSMUST00000221159 852 ntBASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tsen54Q8C2A2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tsen54Q8C2A2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tsen54Q8C2A2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Tsen54Q8C2A2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm8825-201ENSMUST00000182565 998 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm4518-201ENSMUST00000182638 718 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Rps4l-201ENSMUST00000071745 943 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.08□□□□□ -0.48
Tsen54Q8C2A2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms