Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.5□□□□□ -0.25
Cpne1Q8C166 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Mir6990-201ENSMUST00000183724 91 ntBASIC13.5□□□□□ -0.25
Cpne1Q8C166 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.5□□□□□ -0.25
Cpne1Q8C166 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne1Q8C166 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.49□□□□□ -0.25
Cpne1Q8C166 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Gm2810-201ENSMUST00000118681 990 ntBASIC13.49□□□□□ -0.25
Cpne1Q8C166 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Gm18737-201ENSMUST00000173594 937 ntBASIC13.49□□□□□ -0.25
Cpne1Q8C166 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne1Q8C166 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.48□□□□□ -0.25
Cpne1Q8C166 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.48□□□□□ -0.25
Cpne1Q8C166 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpne1Q8C166 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms