Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd9Q8BYH8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm8810-201ENSMUST00000172895 754 ntBASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm43133-201ENSMUST00000197472 463 ntBASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.22□□□□□ -0.61
Chd9Q8BYH8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Mir1943-201ENSMUST00000158276 73 ntBASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm29396-201ENSMUST00000185659 716 ntBASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Olfr284-202ENSMUST00000206647 966 ntBASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd9Q8BYH8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12616-201ENSMUST00000118594 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm10156-201ENSMUST00000122364 462 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12624-201ENSMUST00000177615 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12621-201ENSMUST00000177760 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12615-201ENSMUST00000177970 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12622-201ENSMUST00000177975 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12627-201ENSMUST00000178412 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12625-201ENSMUST00000179122 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12614-201ENSMUST00000179586 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm12613-201ENSMUST00000180323 382 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm27320-201ENSMUST00000184892 109 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Gm45098-201ENSMUST00000207179 657 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd9Q8BYH8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Gm16177-201ENSMUST00000120728 718 ntBASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Gm9550-201ENSMUST00000161130 862 ntBASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Gm20426-201ENSMUST00000173657 440 ntBASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Mir3060-201ENSMUST00000175339 83 ntBASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms