Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Gm11594-201ENSMUST00000122313 162 ntBASIC12.73□□□□□ -0.37
SprnQ8BWU1 Gm5682-201ENSMUST00000173402 505 ntBASIC12.73□□□□□ -0.37
SprnQ8BWU1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Gm6089-201ENSMUST00000197666 938 ntBASIC12.73□□□□□ -0.37
SprnQ8BWU1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.73□□□□□ -0.37
SprnQ8BWU1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.73□□□□□ -0.37
SprnQ8BWU1 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.73□□□□□ -0.37
SprnQ8BWU1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SprnQ8BWU1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.72□□□□□ -0.37
SprnQ8BWU1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.72□□□□□ -0.37
SprnQ8BWU1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.72□□□□□ -0.37
SprnQ8BWU1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SprnQ8BWU1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.71□□□□□ -0.37
SprnQ8BWU1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.71□□□□□ -0.37
SprnQ8BWU1 Gm18041-201ENSMUST00000218210 618 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms