Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm12882-201ENSMUST00000121696 517 ntBASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 AA619741-201ENSMUST00000195095 646 ntBASIC14.76□□□□□ -0.05
Nup54Q8BTS4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Dupd1-202ENSMUST00000224735 548 ntBASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gm13453-201ENSMUST00000118708 357 ntBASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Auts2-212ENSMUST00000178555 309 ntBASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup54Q8BTS4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Mir1897-201ENSMUST00000122581 272 ntBASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.74□□□□□ -0.05
Nup54Q8BTS4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nup54Q8BTS4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms