Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Gm6916-202ENSMUST00000205523 195 ntBASIC15.28■□□□□ 0.04
Rd3Q8BRE0 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Gm8515-201ENSMUST00000194852 576 ntBASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Gm6180-201ENSMUST00000065243 498 ntBASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rd3Q8BRE0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rd3Q8BRE0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rd3Q8BRE0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rd3Q8BRE0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Rd3Q8BRE0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rd3Q8BRE0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rd3Q8BRE0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Gm28631-201ENSMUST00000190740 334 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 AA619741-201ENSMUST00000195095 646 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Gm9797-201ENSMUST00000052902 613 ntBASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rd3Q8BRE0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rd3Q8BRE0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms