Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Rpph1-201ENSMUST00000175096 319 ntBASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Gm10154-201ENSMUST00000084445 354 ntBASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4Q8BQZ5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Gm2272-201ENSMUST00000194903 582 ntBASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4Q8BQZ5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4Q8BQZ5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms