Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco3Q8BQM7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Matn2-206ENSMUST00000228570 2798 ntBASIC11.87□□□□□ -0.51
Smco3Q8BQM7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gm29518-201ENSMUST00000190858 372 ntBASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gm43767-201ENSMUST00000198933 381 ntBASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gm7506-201ENSMUST00000207758 815 ntBASIC11.87□□□□□ -0.51
Smco3Q8BQM7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.87□□□□□ -0.51
Smco3Q8BQM7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.87□□□□□ -0.51
Smco3Q8BQM7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms