Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Gm4804-201ENSMUST00000182234 999 ntBASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcal1Q8BJL0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Gm15957-201ENSMUST00000118893 974 ntBASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Gm15806-201ENSMUST00000120696 955 ntBASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Gm11918-201ENSMUST00000121660 179 ntBASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcal1Q8BJL0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Gm9002-201ENSMUST00000178437 499 ntBASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Gm25857-201ENSMUST00000082788 129 ntBASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcal1Q8BJL0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcal1Q8BJL0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms