Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.23□□□□□ -0.13
Ubp1Q811S7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.23□□□□□ -0.13
Ubp1Q811S7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ubp1Q811S7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Gm37230-201ENSMUST00000194491 818 ntBASIC14.22□□□□□ -0.13
Ubp1Q811S7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ubp1Q811S7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ubp1Q811S7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.21□□□□□ -0.13
Ubp1Q811S7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Gm5312-201ENSMUST00000203728 547 ntBASIC14.21□□□□□ -0.13
Ubp1Q811S7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.21□□□□□ -0.13
Ubp1Q811S7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms