Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 BC037039-201ENSMUST00000192003 2205 ntBASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm15371-201ENSMUST00000117057 784 ntBASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm24420-201ENSMUST00000176676 59 ntBASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm6013-201ENSMUST00000212264 699 ntBASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.11■□□□□ 0.17
Trnp1Q80ZI1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm27772-201ENSMUST00000184900 187 ntBASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm44397-201ENSMUST00000195950 113 ntBASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Trnp1Q80ZI1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnp1Q80ZI1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trnp1Q80ZI1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms