Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.32□□□□□ -0.28
Pif1Q80SX8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Gm15653-201ENSMUST00000119247 907 ntBASIC13.32□□□□□ -0.28
Pif1Q80SX8 Gm13464-201ENSMUST00000119418 935 ntBASIC13.32□□□□□ -0.28
Pif1Q80SX8 Gm12490-201ENSMUST00000120255 560 ntBASIC13.32□□□□□ -0.28
Pif1Q80SX8 Gm6222-201ENSMUST00000120787 396 ntBASIC13.32□□□□□ -0.28
Pif1Q80SX8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pif1Q80SX8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gm4875-201ENSMUST00000118257 786 ntBASIC13.31□□□□□ -0.28
Pif1Q80SX8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gm16476-201ENSMUST00000221544 139 ntBASIC13.31□□□□□ -0.28
Pif1Q80SX8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.31□□□□□ -0.28
Pif1Q80SX8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.31□□□□□ -0.28
Pif1Q80SX8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.31□□□□□ -0.28
Pif1Q80SX8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pif1Q80SX8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Gm27631-201ENSMUST00000184163 466 ntBASIC13.3□□□□□ -0.28
Pif1Q80SX8 Gm28631-201ENSMUST00000190740 334 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms