Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otub1Q7TQI3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Gm16198-201ENSMUST00000118766 670 ntBASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Psmb5-202ENSMUST00000227257 622 ntBASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Otub1Q7TQI3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Gm1401-201ENSMUST00000122048 772 ntBASIC13.72□□□□□ -0.21
Otub1Q7TQI3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Gm5177-201ENSMUST00000183092 997 ntBASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Gm17968-201ENSMUST00000194902 784 ntBASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otub1Q7TQI3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.71□□□□□ -0.21
Otub1Q7TQI3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms