Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gm12882-201ENSMUST00000121696 517 ntBASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gm43703-201ENSMUST00000200523 763 ntBASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gm7730-201ENSMUST00000212486 454 ntBASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubfd1Q78JW9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubfd1Q78JW9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms