Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Gm24196-201ENSMUST00000179161 110 ntBASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.73■□□□□ 0.27
Nup98Q6PFD9 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Gm15429-201ENSMUST00000151268 798 ntBASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup98Q6PFD9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Gm15770-201ENSMUST00000117498 584 ntBASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Gm13829-201ENSMUST00000119600 138 ntBASIC16.72■□□□□ 0.27
Nup98Q6PFD9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Gm24420-201ENSMUST00000176676 59 ntBASIC16.72■□□□□ 0.27
Nup98Q6PFD9 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.72■□□□□ 0.27
Nup98Q6PFD9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup98Q6PFD9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Gm8584-201ENSMUST00000171982 758 ntBASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup98Q6PFD9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.71■□□□□ 0.26
Nup98Q6PFD9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nup98Q6PFD9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms