Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShbQ6PD21 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShbQ6PD21 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShbQ6PD21 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
ShbQ6PD21 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
ShbQ6PD21 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.36■□□□□ 0.05
ShbQ6PD21 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.36■□□□□ 0.05
ShbQ6PD21 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.36■□□□□ 0.05
ShbQ6PD21 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.36■□□□□ 0.05
ShbQ6PD21 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.36■□□□□ 0.05
ShbQ6PD21 Gm42550-201ENSMUST00000201553 960 ntBASIC15.36■□□□□ 0.05
ShbQ6PD21 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ShbQ6PD21 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ShbQ6PD21 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShbQ6PD21 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ShbQ6PD21 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ShbQ6PD21 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm12241-201ENSMUST00000118330 726 ntBASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm25261-201ENSMUST00000157416 134 ntBASIC15.35■□□□□ 0.05
ShbQ6PD21 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm5161-201ENSMUST00000075243 853 ntBASIC15.35■□□□□ 0.05
ShbQ6PD21 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ShbQ6PD21 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Mir497b-201ENSMUST00000093601 125 ntBASIC15.35■□□□□ 0.05
ShbQ6PD21 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.35■□□□□ 0.05
ShbQ6PD21 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShbQ6PD21 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.34■□□□□ 0.05
ShbQ6PD21 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
ShbQ6PD21 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Gm24255-201ENSMUST00000104481 128 ntBASIC15.34■□□□□ 0.05
ShbQ6PD21 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ShbQ6PD21 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ShbQ6PD21 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Gm10268-201ENSMUST00000085340 555 ntBASIC15.34■□□□□ 0.05
ShbQ6PD21 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.34■□□□□ 0.05
ShbQ6PD21 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ShbQ6PD21 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShbQ6PD21 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ShbQ6PD21 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ShbQ6PD21 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ShbQ6PD21 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms