Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Mir8098-201ENSMUST00000184011 137 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Gm28659-201ENSMUST00000188013 759 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcd3Q6P9Z1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gm13036-201ENSMUST00000117799 748 ntBASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gm13464-201ENSMUST00000119418 935 ntBASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd3Q6P9Z1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms