Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Gm27682-201ENSMUST00000183930 110 ntBASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Gm43758-201ENSMUST00000199500 367 ntBASIC21.86■■□□□ 1.09
Slx4Q6P1D7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC21.86■■□□□ 1.09
Slx4Q6P1D7 AC166997.1-201ENSMUST00000225122 572 ntBASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Slx4Q6P1D7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Gm6152-201ENSMUST00000151704 340 ntBASIC21.85■■□□□ 1.09
Slx4Q6P1D7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Gm42471-201ENSMUST00000201457 1865 ntBASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Gm14451-201ENSMUST00000121581 1542 ntBASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slx4Q6P1D7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Gm10156-201ENSMUST00000122364 462 ntBASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Gm7783-201ENSMUST00000204795 781 ntBASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Mir497b-201ENSMUST00000093601 125 ntBASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slx4Q6P1D7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Gm2639-201ENSMUST00000156881 1297 ntBASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Gm43822-201ENSMUST00000200285 476 ntBASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Gm4081-201ENSMUST00000195287 1838 ntBASIC21.83■■□□□ 1.09
Slx4Q6P1D7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slx4Q6P1D7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slx4Q6P1D7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Slx4Q6P1D7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slx4Q6P1D7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slx4Q6P1D7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slx4Q6P1D7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm11793-201ENSMUST00000120433 981 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm4271-201ENSMUST00000174444 973 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm27516-201ENSMUST00000184237 98 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm43818-201ENSMUST00000200605 466 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm29705-201ENSMUST00000212598 474 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm8213-201ENSMUST00000118191 441 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Gm43133-201ENSMUST00000197472 463 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 AC133598.1-201ENSMUST00000224327 660 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slx4Q6P1D7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms