Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.9□□□□□ -0.18
Scube1Q6NZL8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube1Q6NZL8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Scube1Q6NZL8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44357-201ENSMUST00000195897 142 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm19658-201ENSMUST00000196231 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44367-201ENSMUST00000196836 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44350-201ENSMUST00000197197 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44390-201ENSMUST00000197533 144 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44313-201ENSMUST00000198018 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44486-201ENSMUST00000198508 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44314-201ENSMUST00000199263 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44394-201ENSMUST00000199558 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44484-201ENSMUST00000199873 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44466-201ENSMUST00000200264 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44359-201ENSMUST00000200671 138 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scube1Q6NZL8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Gm25406-201ENSMUST00000157599 105 ntBASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Gm18195-201ENSMUST00000207604 706 ntBASIC13.88□□□□□ -0.19
Scube1Q6NZL8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube1Q6NZL8 Gm6296-201ENSMUST00000222599 943 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms