Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Six3Q62233 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Six3Q62233 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Six3Q62233 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.1□□□□□ -0.15
Six3Q62233 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.1□□□□□ -0.15
Six3Q62233 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.1□□□□□ -0.15
Six3Q62233 Gm14042-201ENSMUST00000120139 833 ntBASIC14.1□□□□□ -0.15
Six3Q62233 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.1□□□□□ -0.15
Six3Q62233 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.1□□□□□ -0.15
Six3Q62233 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.1□□□□□ -0.15
Six3Q62233 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.1□□□□□ -0.15
Six3Q62233 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.1□□□□□ -0.15
Six3Q62233 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six3Q62233 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.1□□□□□ -0.15
Six3Q62233 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Gm1401-201ENSMUST00000122048 772 ntBASIC14.09□□□□□ -0.15
Six3Q62233 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.09□□□□□ -0.15
Six3Q62233 Gm45098-201ENSMUST00000207179 657 ntBASIC14.09□□□□□ -0.15
Six3Q62233 Gm5364-201ENSMUST00000216789 889 ntBASIC14.09□□□□□ -0.15
Six3Q62233 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.09□□□□□ -0.15
Six3Q62233 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six3Q62233 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Six3Q62233 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six3Q62233 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Six3Q62233 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six3Q62233 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six3Q62233 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Six3Q62233 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Six3Q62233 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.08□□□□□ -0.16
Six3Q62233 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Gm5479-201ENSMUST00000160578 435 ntBASIC14.08□□□□□ -0.16
Six3Q62233 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Six3Q62233 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.08□□□□□ -0.16
Six3Q62233 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.08□□□□□ -0.16
Six3Q62233 Gm44492-201ENSMUST00000197012 141 ntBASIC14.08□□□□□ -0.16
Six3Q62233 Gm9182-201ENSMUST00000217829 639 ntBASIC14.08□□□□□ -0.16
Six3Q62233 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.08□□□□□ -0.16
Six3Q62233 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Six3Q62233 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six3Q62233 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six3Q62233 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms