Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.29□□□□□ -0.28
VcanQ62059 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
VcanQ62059 Gm20482-202ENSMUST00000174729 825 ntBASIC13.29□□□□□ -0.28
VcanQ62059 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.29□□□□□ -0.28
VcanQ62059 Gm14130-201ENSMUST00000118417 987 ntBASIC13.29□□□□□ -0.28
VcanQ62059 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.29□□□□□ -0.28
VcanQ62059 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VcanQ62059 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
VcanQ62059 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Gm45186-201ENSMUST00000206874 478 ntBASIC13.28□□□□□ -0.28
VcanQ62059 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.28□□□□□ -0.28
VcanQ62059 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
VcanQ62059 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.28□□□□□ -0.28
VcanQ62059 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VcanQ62059 Gm13216-201ENSMUST00000117145 591 ntBASIC13.28□□□□□ -0.28
VcanQ62059 Gm24990-201ENSMUST00000157406 323 ntBASIC13.28□□□□□ -0.28
VcanQ62059 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcanQ62059 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
VcanQ62059 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.27□□□□□ -0.28
VcanQ62059 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.27□□□□□ -0.28
VcanQ62059 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
VcanQ62059 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcanQ62059 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.27□□□□□ -0.28
VcanQ62059 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VcanQ62059 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.27□□□□□ -0.29
VcanQ62059 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.27□□□□□ -0.29
VcanQ62059 Gm11803-201ENSMUST00000119966 444 ntBASIC13.27□□□□□ -0.29
VcanQ62059 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.27□□□□□ -0.29
VcanQ62059 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Gm37835-201ENSMUST00000193305 361 ntBASIC13.27□□□□□ -0.29
VcanQ62059 Gm21769-201ENSMUST00000211922 111 ntBASIC13.27□□□□□ -0.29
VcanQ62059 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VcanQ62059 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcanQ62059 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
VcanQ62059 Gm8213-201ENSMUST00000118191 441 ntBASIC13.26□□□□□ -0.29
VcanQ62059 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms