Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm12882-201ENSMUST00000121696 517 ntBASIC15.02■□□□□ -0
Smarcd1Q61466 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd1Q61466 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.02■□□□□ -0
Smarcd1Q61466 Gm9063-201ENSMUST00000223299 582 ntBASIC15.02■□□□□ -0
Smarcd1Q61466 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smarcd1Q61466 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd1Q61466 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm12428-201ENSMUST00000119844 727 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm12151-201ENSMUST00000121374 290 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm46209-201ENSMUST00000217912 553 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.01□□□□□ -0.01
Smarcd1Q61466 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd1Q61466 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Gm14057-201ENSMUST00000120631 482 ntBASIC15□□□□□ -0.01
Smarcd1Q61466 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Mir8102-201ENSMUST00000184148 139 ntBASIC15□□□□□ -0.01
Smarcd1Q61466 Gm27989-201ENSMUST00000184721 107 ntBASIC15□□□□□ -0.01
Smarcd1Q61466 Gm27321-201ENSMUST00000185021 205 ntBASIC15□□□□□ -0.01
Smarcd1Q61466 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Gm7775-201ENSMUST00000218871 853 ntBASIC15□□□□□ -0.01
Smarcd1Q61466 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15□□□□□ -0.01
Smarcd1Q61466 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcd1Q61466 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd1Q61466 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Mir7684-201ENSMUST00000183858 60 ntBASIC14.99□□□□□ -0.01
Smarcd1Q61466 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms