Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Gm45865-201ENSMUST00000211815 945 ntBASIC15.84■□□□□ 0.13
Col11a1Q61245 Snora73a-201ENSMUST00000082453 205 ntBASIC15.84■□□□□ 0.13
Col11a1Q61245 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col11a1Q61245 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col11a1Q61245 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col11a1Q61245 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col11a1Q61245 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.83■□□□□ 0.12
Col11a1Q61245 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Gm15770-201ENSMUST00000117498 584 ntBASIC15.83■□□□□ 0.12
Col11a1Q61245 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.83■□□□□ 0.12
Col11a1Q61245 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Gm26927-201ENSMUST00000182385 965 ntBASIC15.83■□□□□ 0.12
Col11a1Q61245 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.83■□□□□ 0.12
Col11a1Q61245 Gm29741-201ENSMUST00000192667 421 ntBASIC15.83■□□□□ 0.12
Col11a1Q61245 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.83■□□□□ 0.12
Col11a1Q61245 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.83■□□□□ 0.12
Col11a1Q61245 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Col11a1Q61245 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.83■□□□□ 0.12
Col11a1Q61245 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.83■□□□□ 0.12
Col11a1Q61245 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.83■□□□□ 0.12
Col11a1Q61245 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col11a1Q61245 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.82■□□□□ 0.12
Col11a1Q61245 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col11a1Q61245 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm22323-201ENSMUST00000103832 109 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm12241-201ENSMUST00000118330 726 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm12176-201ENSMUST00000121420 875 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm2991-201ENSMUST00000173338 480 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm18935-201ENSMUST00000212692 664 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col11a1Q61245 Cts7-204ENSMUST00000225321 1257 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.82■□□□□ 0.12
Col11a1Q61245 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.82■□□□□ 0.12
Col11a1Q61245 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.81■□□□□ 0.12
Col11a1Q61245 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.81■□□□□ 0.12
Col11a1Q61245 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms