Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Col12a1Q60847 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Col12a1Q60847 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col12a1Q60847 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.96□□□□□ -0.18
Col12a1Q60847 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col12a1Q60847 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col12a1Q60847 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col12a1Q60847 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Col12a1Q60847 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col12a1Q60847 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col12a1Q60847 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Col12a1Q60847 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm8805-201ENSMUST00000117848 313 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm12485-201ENSMUST00000119641 291 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm20482-202ENSMUST00000174729 825 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm9726-201ENSMUST00000180321 678 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Gm26927-201ENSMUST00000182385 965 ntBASIC13.95□□□□□ -0.18
Col12a1Q60847 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col12a1Q60847 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.94□□□□□ -0.18
Col12a1Q60847 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.94□□□□□ -0.18
Col12a1Q60847 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.94□□□□□ -0.18
Col12a1Q60847 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Gm45186-201ENSMUST00000206874 478 ntBASIC13.94□□□□□ -0.18
Col12a1Q60847 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col12a1Q60847 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.94□□□□□ -0.18
Col12a1Q60847 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Mir686-201ENSMUST00000102174 109 ntBASIC13.94□□□□□ -0.18
Col12a1Q60847 Gm13369-201ENSMUST00000119442 987 ntBASIC13.94□□□□□ -0.18
Col12a1Q60847 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.94□□□□□ -0.18
Col12a1Q60847 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.94□□□□□ -0.18
Col12a1Q60847 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col12a1Q60847 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm4909-201ENSMUST00000118749 794 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm25261-201ENSMUST00000157416 134 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms