Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmn1r223Q5SSA0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmn1r223Q5SSA0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmn1r223Q5SSA0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmn1r223Q5SSA0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmn1r223Q5SSA0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmn1r223Q5SSA0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vmn1r223Q5SSA0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vmn1r223Q5SSA0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gm45167-201ENSMUST00000208007 322 ntBASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 AW822252-206ENSMUST00000208904 237 ntBASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Psmb5-202ENSMUST00000227257 622 ntBASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.64□□□□□ -0.39
Vmn1r223Q5SSA0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.63□□□□□ -0.39
Vmn1r223Q5SSA0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmn1r223Q5SSA0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmn1r223Q5SSA0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.62□□□□□ -0.39
Vmn1r223Q5SSA0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmn1r223Q5SSA0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms