Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm37153-201ENSMUST00000193637 231 ntBASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm9682-201ENSMUST00000197505 556 ntBASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms