Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Gm7488-201ENSMUST00000117148 684 ntBASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Gm14042-201ENSMUST00000120139 833 ntBASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Gm23547-201ENSMUST00000158210 271 ntBASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rc3h1Q4VGL6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Gm9522-201ENSMUST00000182394 926 ntBASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.62■□□□□ 0.25
Rc3h1Q4VGL6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Gm12882-201ENSMUST00000121696 517 ntBASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rc3h1Q4VGL6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms