Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Gm12384-201ENSMUST00000119228 919 ntBASIC17.58■□□□□ 0.41
Shank3Q4ACU6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Gm43822-201ENSMUST00000200285 476 ntBASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Gm19309-201ENSMUST00000218295 205 ntBASIC17.58■□□□□ 0.41
Shank3Q4ACU6 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Shank3Q4ACU6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Gm15371-201ENSMUST00000117057 784 ntBASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Gm3961-201ENSMUST00000204425 994 ntBASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank3Q4ACU6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Gm7783-201ENSMUST00000204795 781 ntBASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Shank3Q4ACU6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm27501-201ENSMUST00000183599 107 ntBASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm45880-201ENSMUST00000213041 853 ntBASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank3Q4ACU6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm38341-201ENSMUST00000195357 515 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Cts7-204ENSMUST00000225321 1257 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms