Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Gm9002-201ENSMUST00000178437 499 ntBASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 AC139350.3-201ENSMUST00000226151 420 ntBASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Gm44719-201ENSMUST00000206404 149 ntBASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Gm5425-201ENSMUST00000214125 459 ntBASIC19.68■□□□□ 0.74
Puf60Q3UEB3 AC156560.2-201ENSMUST00000221232 264 ntBASIC19.68■□□□□ 0.74
Puf60Q3UEB3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.68■□□□□ 0.74
Puf60Q3UEB3 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Puf60Q3UEB3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Puf60Q3UEB3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Gm6266-201ENSMUST00000203844 806 ntBASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Gm18027-201ENSMUST00000218947 619 ntBASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Puf60Q3UEB3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Gm18307-201ENSMUST00000206864 949 ntBASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Gm7446-201ENSMUST00000221035 1240 ntBASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Gm9109-201ENSMUST00000120254 1405 ntBASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Puf60Q3UEB3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms