Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Gm11543-201ENSMUST00000120758 370 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Gm27920-201ENSMUST00000183953 96 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf2Q3UAW9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Brf2Q3UAW9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Brf2Q3UAW9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Brf2Q3UAW9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Gm11779-201ENSMUST00000118541 368 ntBASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.58□□□□□ -0.24
Brf2Q3UAW9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms