Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp25Q3U435 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp25Q3U435 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.57□□□□□ -0.24
Mmp25Q3U435 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.57□□□□□ -0.24
Mmp25Q3U435 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 AA619741-201ENSMUST00000195095 646 ntBASIC13.57□□□□□ -0.24
Mmp25Q3U435 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp25Q3U435 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.56□□□□□ -0.24
Mmp25Q3U435 Gm27631-201ENSMUST00000184163 466 ntBASIC13.56□□□□□ -0.24
Mmp25Q3U435 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.56□□□□□ -0.24
Mmp25Q3U435 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Gm45453-201ENSMUST00000211758 853 ntBASIC13.56□□□□□ -0.24
Mmp25Q3U435 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.56□□□□□ -0.24
Mmp25Q3U435 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Mmp25Q3U435 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Gm24543-201ENSMUST00000103867 82 ntBASIC13.55□□□□□ -0.24
Mmp25Q3U435 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.55□□□□□ -0.24
Mmp25Q3U435 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp25Q3U435 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms