Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Gm42550-201ENSMUST00000201553 960 ntBASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Gm13786-201ENSMUST00000122371 333 ntBASIC17.67■□□□□ 0.42
Vars2Q3U2A8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Gm22902-201ENSMUST00000158488 302 ntBASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Gm17376-201ENSMUST00000166016 84 ntBASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.67■□□□□ 0.42
Vars2Q3U2A8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.67■□□□□ 0.42
Vars2Q3U2A8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gm5687-201ENSMUST00000118252 640 ntBASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gm26927-201ENSMUST00000182385 965 ntBASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gm27341-201ENSMUST00000183570 106 ntBASIC17.66■□□□□ 0.42
Vars2Q3U2A8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vars2Q3U2A8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Gm14381-201ENSMUST00000122105 414 ntBASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Gm8227-201ENSMUST00000223306 571 ntBASIC17.65■□□□□ 0.42
Vars2Q3U2A8 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vars2Q3U2A8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vars2Q3U2A8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Vars2Q3U2A8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vars2Q3U2A8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vars2Q3U2A8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms