Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.01□□□□□ -0.49
Tff1Q08423 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.01□□□□□ -0.49
Tff1Q08423 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tff1Q08423 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.01□□□□□ -0.49
Tff1Q08423 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.01□□□□□ -0.49
Tff1Q08423 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.01□□□□□ -0.49
Tff1Q08423 Gm5186-201ENSMUST00000218781 920 ntBASIC12.01□□□□□ -0.49
Tff1Q08423 Gm18246-201ENSMUST00000221023 728 ntBASIC12.01□□□□□ -0.49
Tff1Q08423 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tff1Q08423 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.01□□□□□ -0.49
Tff1Q08423 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Tff1Q08423 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tff1Q08423 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12□□□□□ -0.49
Tff1Q08423 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12□□□□□ -0.49
Tff1Q08423 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12□□□□□ -0.49
Tff1Q08423 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tff1Q08423 Gm7787-201ENSMUST00000216858 688 ntBASIC12□□□□□ -0.49
Tff1Q08423 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12□□□□□ -0.49
Tff1Q08423 AC159114.1-201ENSMUST00000220349 266 ntBASIC12□□□□□ -0.49
Tff1Q08423 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12□□□□□ -0.49
Tff1Q08423 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tff1Q08423 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tff1Q08423 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tff1Q08423 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tff1Q08423 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tff1Q08423 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Tff1Q08423 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.99□□□□□ -0.49
Tff1Q08423 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.99□□□□□ -0.49
Tff1Q08423 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tff1Q08423 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms