Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.67□□□□□ -0.38
Thbs3Q05895 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.67□□□□□ -0.38
Thbs3Q05895 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.67□□□□□ -0.38
Thbs3Q05895 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.67□□□□□ -0.38
Thbs3Q05895 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.66□□□□□ -0.38
Thbs3Q05895 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.66□□□□□ -0.38
Thbs3Q05895 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.66□□□□□ -0.38
Thbs3Q05895 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm9824-201ENSMUST00000178707 561 ntBASIC12.66□□□□□ -0.38
Thbs3Q05895 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm18049-201ENSMUST00000208909 581 ntBASIC12.66□□□□□ -0.38
Thbs3Q05895 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.66□□□□□ -0.38
Thbs3Q05895 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thbs3Q05895 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.65□□□□□ -0.38
Thbs3Q05895 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.65□□□□□ -0.38
Thbs3Q05895 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.65□□□□□ -0.38
Thbs3Q05895 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Thbs3Q05895 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.65□□□□□ -0.38
Thbs3Q05895 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.65□□□□□ -0.38
Thbs3Q05895 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.65□□□□□ -0.38
Thbs3Q05895 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.65□□□□□ -0.38
Thbs3Q05895 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Gm43474-201ENSMUST00000196415 774 ntBASIC12.65□□□□□ -0.38
Thbs3Q05895 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.65□□□□□ -0.38
Thbs3Q05895 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thbs3Q05895 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms