Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Scn1bP97952 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scn1bP97952 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn1bP97952 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scn1bP97952 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Scn1bP97952 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.19□□□□□ -0.3
Scn1bP97952 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn1bP97952 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1bP97952 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn1bP97952 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Grk6-207ENSMUST00000225925 2769 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn1bP97952 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Scn1bP97952 Gm7284-201ENSMUST00000131667 944 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn1bP97952 Mir3081-201ENSMUST00000175305 84 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 Gm44454-201ENSMUST00000198541 138 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Scn1bP97952 Gm18041-201ENSMUST00000218210 618 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.18□□□□□ -0.3
Scn1bP97952 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn1bP97952 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn1bP97952 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn1bP97952 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1bP97952 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.17□□□□□ -0.3
Scn1bP97952 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn1bP97952 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn1bP97952 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn1bP97952 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn1bP97952 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn1bP97952 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn1bP97952 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1bP97952 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms