Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
SgcaP82350 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.11□□□□□ -0.47
SgcaP82350 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.11□□□□□ -0.47
SgcaP82350 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgcaP82350 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgcaP82350 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.11□□□□□ -0.47
SgcaP82350 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcaP82350 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgcaP82350 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.1□□□□□ -0.47
SgcaP82350 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SgcaP82350 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SgcaP82350 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gm15165-201ENSMUST00000118140 502 ntBASIC12.1□□□□□ -0.47
SgcaP82350 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gm25016-201ENSMUST00000158399 131 ntBASIC12.1□□□□□ -0.47
SgcaP82350 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.1□□□□□ -0.47
SgcaP82350 Gm7506-201ENSMUST00000207758 815 ntBASIC12.1□□□□□ -0.47
SgcaP82350 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.1□□□□□ -0.47
SgcaP82350 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SgcaP82350 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.1□□□□□ -0.47
SgcaP82350 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SgcaP82350 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.1□□□□□ -0.47
SgcaP82350 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.1□□□□□ -0.47
SgcaP82350 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcaP82350 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
SgcaP82350 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SgcaP82350 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.09□□□□□ -0.47
SgcaP82350 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.09□□□□□ -0.47
SgcaP82350 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.09□□□□□ -0.47
SgcaP82350 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.09□□□□□ -0.47
SgcaP82350 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SgcaP82350 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SgcaP82350 Gm8655-201ENSMUST00000221159 852 ntBASIC12.09□□□□□ -0.47
SgcaP82350 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms