Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SgcbP82349 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SgcbP82349 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SgcbP82349 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Efs-202ENSMUST00000227037 2540 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SgcbP82349 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.87□□□□□ -0.35
SgcbP82349 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.87□□□□□ -0.35
SgcbP82349 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SgcbP82349 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SgcbP82349 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SgcbP82349 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.87□□□□□ -0.35
SgcbP82349 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SgcbP82349 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SgcbP82349 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
SgcbP82349 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SgcbP82349 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.86□□□□□ -0.35
SgcbP82349 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SgcbP82349 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.86□□□□□ -0.35
SgcbP82349 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.86□□□□□ -0.35
SgcbP82349 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SgcbP82349 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcbP82349 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.86□□□□□ -0.35
SgcbP82349 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SgcbP82349 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.85□□□□□ -0.35
SgcbP82349 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.85□□□□□ -0.35
SgcbP82349 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms